Senior Data Engineer @ California Institute of Technology - Pasadena, CA

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Senior Data Engineer

California Institute of TechnologyPasadena, CA
5 days ago
Senior Data Engineer

Job Category: Fulltime Regular
Exempt Overtime Eligible: Exempt
Benefits Eligible: Benefit Based

Caltech is a world-renowned science and engineering institute that marshals some of the world's brightest minds and most innovative tools to address fundamental scientific questions. We thrive on finding and cultivating talented people who are passionate about what they do. Join us and be a part of the diverse Caltech community.

Job Summary

We seek a highly motivated and dependable individual to join the Van Valen lab as a Senior Data Engineer. This individual will collaborate with graduate students, postdoctoral scholars, and staff to create annotated image datasets for deep-learning algorithms for cellular image analysis.

Essential Job Duties
  • Lead efforts in the reviewing and correcting of biological image annotations.
  • Analyze and identify critical datasets for annotation.
  • Create annotation protocols for novel tissue types.
  • Extract relevant images and videos from scientific publications.
  • Coordinate with crowdsourcing companies to make clear and concise annotation instructions.
  • Provide feedback on data quality and software performance to develop annotation workflows.
  • Provide biological insights to machine learning team.
  • Update and maintain image databases.
  • Communicate efficiently with the manager, team members, researchers, and other support groups.

Basic Qualifications
  • Bachelor's degree with at least 5 years of relevant experience.
  • Experience with histology samples.
  • Demonstrated proficiency with computers.
  • Ability to perform repetitive tasks while paying close attention to detail.
  • Ability to extract relevant metadata from scientific publications.
  • Strong organizational skills.
  • Ability to work independently and in team settings.

Preferred Qualifications
  • Ph.D. with biologic imaging experience.
  • Experience with biological image annotation.
  • Experience working in a team-oriented environment.
  • Experience interpreting microscopy images to identify microstructures, staining patterns, and cellular boundaries.
  • Experience with Matlab, Python, or other programming languages.
  • Experience with version control software (i.e. git).

Required Documents
  • Resume

To be considered for this position please visit our web site and apply on line at the following link:

We are an equal opportunity employer and all qualified applicants will receive consideration for employment without regard to race, color, religion, sex, national origin, disability status, protected veteran status, or any other characteristic protected by law.